Lachnospiraceae bacterium AC2014
Introduction
Lachnospiraceae bacterium AC2014
Lachnospiraceae bacterium AC2014 (DSM 118844) was isolated from the plant-adherent fraction of bovine rumen contents in NZ [1, cow C]. It has not been phenotypically characterized, but was identified as a strain of Agathobacter ruminis, a carbohydrate-fermenting bacterium that produces butyrate, acetate, lactate and hydrogen [2].
The draft genome for AC2014 (2,760,118 bp) was generated through the Hungate1000 project with JGI [3].
NCBI: Lachnospiraceae bacterium.
GTDB: Roseburia ruminis. AC2014 belongs in the same species group as the type strain of A. ruminis/R. ruminis (JK623, DSM 29029) [2].
Risk group: 1.
Global Methane Hub Metadata
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Genome
DefenseFinder Results
Methylome
Methylating E. coli Strains
Culturing Conditions
Antibiotic MIC Tests
Protocols
Transformation Results
External Links
[1] Noel S. 2013. Cultivation and community composition analysis of plant-adherent rumen bacteria. PhD dissertation. Massey University, Palmerston North, New Zealand. https://mro.massey.ac.nz/server/api/core/bitstreams/bcfbe4cb-19a9-40c0-b5e8-61f9ddb90ce0/content.
[2] Rosero JA, Killer J, Sechovcova H, Mrazek J, Benada O, Fliegerova K, Havlik J, Kopecny J. 2016. Reclassification of Eubacterium rectale (Hauduroy et al. 1937) Prevot 1938 in a new genus Agathobacter gen. nov. as Agathobacter rectalis comb. nov., and description of Agathobacter ruminis sp. nov., isolated from the rumen contents of sheep and cows. Int J Syst Evol Microbiol 66: 768-773. doi: 10.1099/ijsem.0.000788.
[3] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.
