Lachnobacterium bovis AE2004

Introduction

Lachnobacterium bovis AE2004

Lachnobacterium bovis AE2004 (DSM 120349) was isolated from the plant-adherent fraction of bovine rumen contents in NZ [1, cow E]. It has not been phenotypically characterized, but was identified as a strain of Lachnobacterium bovis, a carbohydrate-fermenting bacterium that produces lactate and minor amounts of acetate and butyrate [2]. Lachnobacterium is a genus within the family Lachnospiraceae.

The draft genome for AE2004 (2,844,447 bp) was generated through the Hungate1000 project with JGI [3].

NCBI: Lachnobacterium bovis.

GTDB: Roseburia bovis_A. AE2004 belongs to a different species group than the L. bovis/R. bovis type strain (YZ 87, DSM 14045) [2].

Risk group: 1.

Global Methane Hub Metadata

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External Links

[1] Noel S. 2013. Cultivation and community composition analysis of plant-adherent rumen bacteria. PhD dissertation. Massey University, Palmerston North, New Zealand. https://mro.massey.ac.nz/server/api/core/bitstreams/bcfbe4cb-19a9-40c0-b5e8-61f9ddb90ce0/content.

[2] Whitford MF, Yanke LJ, Forster RJ, Teather RM. Lachnobacterium bovis gen. nov., sp. nov., a novel bacterium isolated from the rumen and faeces of cattle. 2001. Int J Syst Evol Microbiol  51: 1977-1981. doi: 10.1099/00207713-51-6-1977.

[3] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.