Genome
Methylome
Caption text
| motif |
# site methylated |
total sites |
% methylated
|
| ATTA(6mA)T |
Example |
Example |
Example
|
| C(5mC)TGA |
Example |
Example |
Example
|
E.coli methylation strain
Completed, AG20809
Antibiotic MIC tests
MIC test strip result
MIC test strip result
| Antibiotic |
MIC
|
| Ampicillin |
0.016ug/ml
|
| streptomycin |
6ug/ml
|
| gentamicin |
0.38ug/ml
|
| Spectinomycin |
2ug/ml
|
| Chloramphenicol |
0.5ug/ml
|
| Erythromycin |
Resistant
|
| Tetracycline |
Resistant
|
| kanamycin |
Resistant
|
Defensefinder prediction
- Predicted RM I, II, III is not listed
Defense Systems
| Type / Subtype |
Mechanism |
Note
|
| SspBCDE (SspBCDE) |
Cut DNA without phosphorothioate modification |
Lacks SspA & SspE (endonuclease)
|
| HEC-02 (HEC-02) |
|
|
| Wadjet (Wadjet_I) |
against closed-circular DNA (regardless of supercoiling state) |
Lacks JetD (endonuclease)
|
| AbiL (AbiL) |
Against phage |
|
| MazEF (MazEF) |
Against phage |
|
| AbiD (AbiD) |
Against phage |
|
