Lachnospiraceae bacterium FE2018
Introduction
Lachnospiraceae bacterium FE2018
Lachnospiraceae bacterium FE2018 was isolated from the plant-adherent fraction of bovine rumen contents in NZ [1, cow E]. It has not been phenotypically characterized, but the genome encodes a lactate utilization gene cluster. In GTDB FE2018 has been assigned to an uncharacterized genus (CADBRN01) within the family Lachnospiraceae.
The draft genome for FE2018 (3,213,641 bp) was generated through the Hungate1000 project with JGI [2].
NCBI: Lachnospiraceae bacterium.
GTDB: CADBRN01 sp000702845.
Risk group: 1.
Global Methane Hub Metadata
| Origin: | |
| Sequenced by: | |
| Assembled by: | |
| Methylome called by: | |
| Methyltransferases cloned by: | |
| MIC and Culturing Conditions by: | |
| Transformation by: |
Genome
DefenseFinder Results
Methylome
Methylating E. coli Strains
Culturing Conditions
Antibiotic MIC Tests
Protocols
Transformation Results
External Links
[1] Noel S. 2013. Cultivation and community composition analysis of plant-adherent rumen bacteria. PhD dissertation. Massey University, Palmerston North, New Zealand. https://mro.massey.ac.nz/server/api/core/bitstreams/bcfbe4cb-19a9-40c0-b5e8-61f9ddb90ce0/content.
[2] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.
