Ruminococcus sp. HUN007
Introduction
Ruminococcaceae sp. HUN007
Ruminococcaceae sp. HUN007 was isolated from the plant-adherent fraction of bovine rumen contents in NZ [1]. HUN007 has not been phenotypically characterized but its genome encodes a broad range of carbohydrate active enzymes, many of which contain cohesion and dockerin domains. HUN007 is predicted to be cellulolytic and to produce a functional cellulosome but is distinct from R. flavefaciens. In GTDB HUN007 is used as the name of a genus within the family Ruminococcaceae.
The draft genome for HUN007 (4,207,177 bp) was generated through the Hungate1000 project with JGI [2].
NCBI: Ruminococcus sp.
GTDB: HUN007 sp000712055.
Risk group: 1.
Global Methane Hub Metadata
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Genome
DefenseFinder Results
Methylome
Methylating E. coli Strains
Culturing Conditions
Antibiotic MIC Tests
Protocols
Transformation Results
External Links
[1] Noel S. 2013. Cultivation and community composition analysis of plant-adherent rumen bacteria. PhD dissertation. Massey University, Palmerston North, New Zealand. https://mro.massey.ac.nz/server/api/core/bitstreams/bcfbe4cb-19a9-40c0-b5e8-61f9ddb90ce0/content.
[2] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.
