Selenomonas ruminantium AB3002
Introduction
Selenomonas sp. AB3002
Selenomonas sp. AB3002 was isolated from the plant-adherent fraction of bovine rumen contents in NZ [1, cow B). AB3002 is an anaerobic bacterium that ferments a broad range of carbohydrates and produces primarily propionate, lactate, and CO₂. Lactate is not fermented, fumarate is reduced but nitrate and sulfate are not.
The draft genome for AB3002 (3,665,894 bp) was generated through the Hungate1000 project with JGI [2].
NCBI: Selenomonas sp.
GTDB: Selenomonas_B ruminantium_A. With bacteria classified as Selenomonas_A renamed as Pseudoselenomonas it is likely that this organism will be assigned to a yet unnamed genus.
Risk group: 1.
Global Methane Hub Metadata
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Genome
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DefenseFinder Results
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Methylome
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Methylating E. coli
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Culturing Conditions
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Antimicrobial MIC Tests
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Protocols
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Transformation Results
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External Links
[1] Noel S. 2013. Cultivation and community composition analysis of plant-adherent rumen bacteria. PhD dissertation. Massey University, Palmerston North, New Zealand. https://mro.massey.ac.nz/server/api/core/bitstreams/bcfbe4cb-19a9-40c0-b5e8-61f9ddb90ce0/content.
[2] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.
