Butyrivibrio fibrisolvens TB
From Global Methane Hub Wikipedia
Bacillota (firmicutes)- Clostridia- Lachnospirales- Lachnospiraceae- Butyrivibrio
Genome
Methylome
| motif | # site methylated | total sites | % methylated |
|---|---|---|---|
| ATTA(6mA)T | Example | Example | Example |
| C(5mC)TGA | Example | Example | Example |
E.coli methylation strain
Completed, AG20809
Antibiotic MIC tests
MIC test strip result
| Antibiotic | MIC |
|---|---|
| Ampicillin | 0.016ug/ml |
| streptomycin | 6ug/ml |
| gentamicin | 0.38ug/ml |
| Spectinomycin | 2ug/ml |
| Chloramphenicol | 0.5ug/ml |
| Erythromycin | Resistant |
| Tetracycline | Resistant |
| kanamycin | Resistant |
Defensefinder prediction
- Predicted RM I, II, III is not listed
| Type / Subtype | Mechanism | Note |
|---|---|---|
| SspBCDE (SspBCDE) | Cut DNA without phosphorothioate modification | Lacks SspA & SspE (endonuclease) |
| HEC-02 (HEC-02) | ||
| Wadjet (Wadjet_I) | against closed-circular DNA (regardless of supercoiling state) | Lacks JetD (endonuclease) |
| AbiL (AbiL) | Against phage | |
| MazEF (MazEF) | Against phage | |
| AbiD (AbiD) | Against phage |
