Scanning electron microscopy (SEM) image of Acetitomaculum ruminis 139B. Source: Yuqi Li
Introduction
| Origin:
|
Illinois, Mackie Lab
|
| Sequenced by:
|
Yuqi Li
|
| Assembled by:
|
William G. Alexander
|
| Methylome called by:
|
William G. Alexander
|
| MIC and Culturing Conditions by:
|
Yuqi Li
|
Genome
Circos plot of Acetitomaculum ruminis 139B. Source: Yuqi Li
DefenseFinder Results
Methylome
| Motif
|
Percent methylated
|
| CTGC(6mA)G
|
95.68%
|
| TA(6mA)GNNNNNNTCC
|
95.61%
|
| GG(6mA)NNNNNNCTTA
|
96.1%
|
| G(6mA)TGNNNNNNTCC
|
84.95%
|
| GG(6mA)NNNNNNCATT
|
92.38%
|
| G(6mA)TCG
|
89.82%
|
| A(6mA)TGNNNNNNTCC
|
96.19%
|
| GG(6mA)NNNNNNCATT
|
90.36%
|
| GAT(5mC)
|
32.66%
|
Methylating E. coli Strains
Culturing Conditions
Antibiotic MIC Tests
MIC tests of Acetitomaculum ruminis 139B. Source: Yuqi Li
| Antibiotic
|
Concentration (μg/mL)
|
| Ampicillin
|
0.52
|
| Kanamycin
|
Resistant (>200 μg/mL)
|
| Chloramphenicol
|
Resistant (>200 μg/mL)
|
| Tetracycline
|
0.20
|
| Gentamicin
|
Resistant (>200 μg/mL)
|
| Streptomycin
|
Resistant (>200 μg/mL)
|
| Erythromycin
|
4.3
|
Protocols
External Links
