Acetitomaculum ruminis 139BT: Difference between revisions
From Global Methane Hub Wikipedia
| Line 27: | Line 27: | ||
== Methylome == | == Methylome == | ||
{| class="wikitable" | |||
!Motif | |||
!Percent methylated | |||
|- | |||
|CTGC(6mA)G | |||
| align="right" |95.68% | |||
|- | |||
|TA(6mA)GNNNNNNTCC | |||
| align="right" |95.61% | |||
|- | |||
|GG(6mA)NNNNNNCTTA | |||
| align="right" |96.1% | |||
|- | |||
|G(6mA)TGNNNNNNTCC | |||
| align="right" |84.95% | |||
|- | |||
|GG(6mA)NNNNNNCATT | |||
| align="right" |92.38% | |||
|- | |||
|G(6mA)TCG | |||
| align="right" |89.82% | |||
|- | |||
|A(6mA)TGNNNNNNTCC | |||
| align="right" |96.19% | |||
|- | |||
|GG(6mA)NNNNNNCATT | |||
| align="right" |90.36% | |||
|- | |||
|GAT(5mC) | |||
| align="right" |32.66% | |||
|} | |||
== Methylating E. coli Strains == | == Methylating E. coli Strains == | ||
Revision as of 23:48, 28 October 2026
Introduction
Global Methane Hub Metadata
| Origin: | Illinois, Mackie Lab |
| Sequenced by: | Yuqi Li |
| Assembled by: | William G. Alexander |
| Methylome called by: | William G. Alexander |
| MIC and Culturing Conditions by: | Yuqi Li |
Genome
DefenseFinder Results
Methylome
| Motif | Percent methylated |
|---|---|
| CTGC(6mA)G | 95.68% |
| TA(6mA)GNNNNNNTCC | 95.61% |
| GG(6mA)NNNNNNCTTA | 96.1% |
| G(6mA)TGNNNNNNTCC | 84.95% |
| GG(6mA)NNNNNNCATT | 92.38% |
| G(6mA)TCG | 89.82% |
| A(6mA)TGNNNNNNTCC | 96.19% |
| GG(6mA)NNNNNNCATT | 90.36% |
| GAT(5mC) | 32.66% |
