Acetitomaculum ruminis 139BT: Difference between revisions
From Global Methane Hub Wikipedia
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== Antibiotic MIC Tests == | == Antibiotic MIC Tests == | ||
[[File:139BMIC.png | [[File:139BMIC.png|thumb|MIC tests of ''Acetitomaculum ruminis'' 139B. Source: Yuqi Li|left]] | ||
{| class="wikitable" | {| class="wikitable" | ||
!Antibiotic | !Antibiotic | ||
| Line 72: | Line 72: | ||
|- | |- | ||
|Ampicillin | |Ampicillin | ||
| | |Resistant (>200 μg/mL) | ||
|- | |- | ||
|Kanamycin | |Kanamycin | ||
| Line 78: | Line 78: | ||
|- | |- | ||
|Chloramphenicol | |Chloramphenicol | ||
| | |1.03 | ||
|- | |- | ||
|Tetracycline | |Tetracycline | ||
|0. | |0.19 | ||
|- | |- | ||
|Gentamicin | |Gentamicin | ||
| | |4.75 | ||
|- | |- | ||
|Streptomycin | |Streptomycin | ||
| Line 90: | Line 90: | ||
|- | |- | ||
|Erythromycin | |Erythromycin | ||
| | |2.67 | ||
|} | |} | ||
Revision as of 23:54, 28 October 2026
Introduction
Global Methane Hub Metadata
| Origin: | Illinois, Mackie Lab |
| Sequenced by: | Yuqi Li |
| Assembled by: | William G. Alexander |
| Methylome called by: | William G. Alexander |
| MIC and Culturing Conditions by: | Yuqi Li |
Genome
DefenseFinder Results
Methylome
| Motif | Percent methylated |
|---|---|
| CTGC(6mA)G | 95.68% |
| TA(6mA)GNNNNNNTCC | 95.61% |
| GG(6mA)NNNNNNCTTA | 96.1% |
| G(6mA)TGNNNNNNTCC | 84.95% |
| GG(6mA)NNNNNNCATT | 92.38% |
| G(6mA)TCG | 89.82% |
| A(6mA)TGNNNNNNTCC | 96.19% |
| GG(6mA)NNNNNNCATT | 90.36% |
| GAT(5mC) | 32.66% |
Methylating E. coli Strains
Culturing Conditions
Antibiotic MIC Tests
| Antibiotic | Concentration (μg/mL) |
|---|---|
| Ampicillin | Resistant (>200 μg/mL) |
| Kanamycin | Resistant (>200 μg/mL) |
| Chloramphenicol | 1.03 |
| Tetracycline | 0.19 |
| Gentamicin | 4.75 |
| Streptomycin | Resistant (>200 μg/mL) |
| Erythromycin | 2.67 |
