Prevotella bryantii C21a: Difference between revisions
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== Introduction == | |||
'''''Segatella bryantii'' C21a''' | |||
''Segatella bryantii'' C21a, formerly ''Prevotella bryantii'', was isolated from bovine rumen contents in NZ [1]. C21a is proteolytic, Gram negative, and able to ferment a wide range of carbohydrates. Its main fermentation product is lactate, together with succinate and acetate [1]. | |||
Taxonomic analysis of the genus ''Prevotella'' lists B14 as the ''S. bryantii'' type strain [2]. However, NCBI now records B14 and C21a as belonging to the species ''Segatella baroniae''. | |||
The draft genome for C21a (3,249,285 bp) was generated through the Hungate1000 project with JGI [3]. | |||
NCBI: ''Segatella baroniae''. | |||
GTBD: ''Prevotella bryantii''. C21a groups with the type strain of ''S. bryantii'' (B14, DSM 11371) | |||
Risk group: 2. | |||
== Global Methane Hub Metadata == | |||
add here | |||
== Genome == | |||
add here | |||
== DefenseFinder Results == | |||
add here | |||
== Methylome == | == Methylome == | ||
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== Methylating ''E. coli'' == | |||
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== Culturing Conditions == | |||
add here | |||
== Antimicrobial MIC Tests == | |||
add here | |||
== Protocols == | |||
add here | |||
== Transformation Results == | |||
add here | |||
== External Links == | |||
[1] Attwood GT, Reilly K. 1995. Identification of proteolytic rumen bacteria isolated from New Zealand cattle. J Appl Bacteriol 79: 22-9. doi: 10.1111/j.1365-2672.1995.tb03119.x. | |||
[2] Hitch TCA, Bisdorf K, Afrizal A, Riedel T, Overmann J, Strowig T, Clavel T. 2022. A taxonomic note on the genus ''Prevotella'': Description of four novel genera and emended description of the genera ''Hallella'' and ''Xylanibacter''. Syst Appl Microbiol 45: 126354. doi: 10.1016/j.syapm.2022.126354. | |||
[3] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110. | |||
Latest revision as of 00:42, 27 October 2026
Introduction
Segatella bryantii C21a
Segatella bryantii C21a, formerly Prevotella bryantii, was isolated from bovine rumen contents in NZ [1]. C21a is proteolytic, Gram negative, and able to ferment a wide range of carbohydrates. Its main fermentation product is lactate, together with succinate and acetate [1].
Taxonomic analysis of the genus Prevotella lists B14 as the S. bryantii type strain [2]. However, NCBI now records B14 and C21a as belonging to the species Segatella baroniae.
The draft genome for C21a (3,249,285 bp) was generated through the Hungate1000 project with JGI [3].
NCBI: Segatella baroniae.
GTBD: Prevotella bryantii. C21a groups with the type strain of S. bryantii (B14, DSM 11371)
Risk group: 2.
Global Methane Hub Metadata
add here
Genome
add here
DefenseFinder Results
add here
Methylome
| Motif | Percent methylated |
|---|---|
| ACGC(6mA)B | 98.66% |
| CAAG(6mA)T | 96.36% |
Methylating E. coli
add here
Culturing Conditions
add here
Antimicrobial MIC Tests
add here
Protocols
add here
Transformation Results
add here
External Links
[1] Attwood GT, Reilly K. 1995. Identification of proteolytic rumen bacteria isolated from New Zealand cattle. J Appl Bacteriol 79: 22-9. doi: 10.1111/j.1365-2672.1995.tb03119.x.
[2] Hitch TCA, Bisdorf K, Afrizal A, Riedel T, Overmann J, Strowig T, Clavel T. 2022. A taxonomic note on the genus Prevotella: Description of four novel genera and emended description of the genera Hallella and Xylanibacter. Syst Appl Microbiol 45: 126354. doi: 10.1016/j.syapm.2022.126354.
[3] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.
