Ruminococcus albus 7 - Revision history

Madachi: /* Methylome */

2026-10-30T18:16:02Z

Methylome

← Older revision		Revision as of 18:16, 30 October 2026
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	\|-		\|-
	\|G(6mA)TC		\|G(6mA)TC
	\|		\|99.9
	\|-		\|-
	\|GCGC(6mA)G		\|GCGC(6mA)G
	\|		\|96.79
	\|-		\|-
	\|CAG(6mA)KC		\|CAG(6mA)KC
	\|		\|99.54
	\|-		\|-
	\|CTYR(6mA)G		\|CTYR(6mA)G
	\|		\|83.68
	\|-		\|-
	\|C(6mA)GNNNNNNNTTYG/		\|C(6mA)GNNNNNNNTTYG/

	CRA(6mA)NNNNNNNCTG		CRA(6mA)NNNNNNNCTG
	\|		\|96/99.89
	\|-		\|-
	\|G(6mA)STC		\|G(6mA)STC
	\|		\|98.94
	\|-		\|-
	\|GAGG(6mA)G		\|GAGG(6mA)G
	\|		\|97.58
	\|-		\|-
	\|G(5mC)WGC		\|G(5mC)WGC
	\|		\|84.64
	\|-		\|-
	\|GGN(5mC)C		\|GGN(5mC)C
	\|		\|72.94
	\|-		\|-
	\|CTC(4mC)TC		\|CTC(4mC)TC
	\|		\|95.86
	\|}		\|}

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	== Antimicrobial MIC Tests ==		== Antimicrobial MIC Tests ==
	Note: Antimicrobial MIC was assessed using M2GSC liquid medium.		Note: Antimicrobial MIC was assessed using [[M2GSC Medium\|M2GSC]] liquid medium.
	{\| class="wikitable"		{\| class="wikitable"
	\|+		\|+

Madachi: /* Global Methane Hub Metadata */

2026-10-30T18:11:16Z

Global Methane Hub Metadata

← Older revision		Revision as of 18:11, 30 October 2026
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	\|+		\|+
	\|Origin:		\|Origin:
	\|United States of America, ~~Macike~~ lab		\|United States of America, Mackie lab
	\|-		\|-
	\|Sequenced by:		\|Sequenced by:

Madachi: /* Introduction */

2026-10-30T18:10:16Z

Introduction

← Older revision		Revision as of 18:10, 30 October 2026
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	== Introduction ==		== Introduction ==
	'''''Ruminococcus albus''''' '''7 (DSM 20455 ATCC ~~27210 7~~ JCM 14654)'''		'''''Ruminococcus albus''''' '''7 (DSM 20455 ATCC 272107 JCM 14654)'''

	''Ruminococcus albus'' 7 is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].		''Ruminococcus albus'' 7 is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].

Madachi: /* Introduction */

2026-10-29T22:20:34Z

Introduction

← Older revision		Revision as of 22:20, 29 October 2026
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	'''''Ruminococcus albus''''' '''7 (DSM 20455 ATCC 27210 7 JCM 14654)'''		'''''Ruminococcus albus''''' '''7 (DSM 20455 ATCC 27210 7 JCM 14654)'''

	''Ruminococcus albus'' ~~(strain~~ 7) is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].		''Ruminococcus albus'' 7 is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].

	This bacterium have high cellolytic ability and play a key roll for initial fiber degradation in rumen. Additioally, the production of H<sub>2</sub> during fermentation by ''R. albus'', providing electrons for CO₂ reduction and methane production by methanogenic archaea [3]. Consequently, understanding the metabolic pathways and symbiotic relationships of ''R. albus'' 7 is essential for ongoing research aimed at mitigating enteric methane emissions from livestock.		This bacterium have high cellolytic ability and play a key roll for initial fiber degradation in rumen. Additioally, the production of H<sub>2</sub> during fermentation by ''R. albus'', providing electrons for CO₂ reduction and methane production by methanogenic archaea [3]. Consequently, understanding the metabolic pathways and symbiotic relationships of ''R. albus'' 7 is essential for ongoing research aimed at mitigating enteric methane emissions from livestock.

Madachi: /* Introduction */

2026-10-29T22:19:39Z

Introduction

← Older revision		Revision as of 22:19, 29 October 2026
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	== Introduction ==		== Introduction ==
	'''''Ruminococcus albus''''' '''7'''		'''''Ruminococcus albus''''' '''7 (DSM 20455 ATCC 27210 7 JCM 14654)'''

	''Ruminococcus albus'' (strain 7) is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].		''Ruminococcus albus'' (strain 7) is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].

Madachi: /* Culturing Conditions */

2026-10-29T22:10:42Z

Culturing Conditions

← Older revision		Revision as of 22:10, 29 October 2026
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	== Culturing Conditions ==		== Culturing Conditions ==
	''R. albus'' 7 grown well in [[M2GSC]] and [[M10 Medium\|M10]] medium at 37°C. Plating efficiency of ''R. albus'' 7 on M10 agar is close to 100%.		''R. albus'' 7 grown well in [[M2GSC Medium\|M2GSC]] and [[M10 Medium\|M10]] medium at 37°C. Plating efficiency of ''R. albus'' 7 on M10 agar is close to 100%.

	== Antimicrobial MIC Tests ==		== Antimicrobial MIC Tests ==

Madachi: /* Introduction */

2026-10-29T19:04:36Z

Introduction

← Older revision		Revision as of 19:04, 29 October 2026
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	This bacterium have high cellolytic ability and play a key roll for initial fiber degradation in rumen. Additioally, the production of H<sub>2</sub> during fermentation by ''R. albus'', providing electrons for CO₂ reduction and methane production by methanogenic archaea [3]. Consequently, understanding the metabolic pathways and symbiotic relationships of ''R. albus'' 7 is essential for ongoing research aimed at mitigating enteric methane emissions from livestock.		This bacterium have high cellolytic ability and play a key roll for initial fiber degradation in rumen. Additioally, the production of H<sub>2</sub> during fermentation by ''R. albus'', providing electrons for CO₂ reduction and methane production by methanogenic archaea [3]. Consequently, understanding the metabolic pathways and symbiotic relationships of ''R. albus'' 7 is essential for ongoing research aimed at mitigating enteric methane emissions from livestock.

			LPSN: ''Ruminococcus albus'' Hungate 1957

			NCBI: ''Ruminococcus albus''

			GTDB: ''Ruminococcus albus''

			Risk group: 1

	== Global Methane Hub Metadata ==		== Global Methane Hub Metadata ==

Madachi: /* Antimicrobial MIC Tests */

2026-10-28T23:49:26Z

Antimicrobial MIC Tests

← Older revision		Revision as of 23:49, 28 October 2026
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	\|Streptomycin		\|Streptomycin
	\|Resistance (>200)		\|Resistance (>200)
			\|-
			\|Tetracycline
			\|1.0
	\|}		\|}

Madachi at 23:40, 28 October 2026

2026-10-28T23:40:35Z

← Older revision		Revision as of 23:40, 28 October 2026
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	== Introduction ==		== Introduction ==
	'''''Ruminococcus albus 7'''''		'''''Ruminococcus albus''''' '''7'''

	Ruminococcus albus (strain 7) is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].		''Ruminococcus albus'' (strain 7) is an obligately anaerobic, Gram-positive bacterium first isolated from the bovine rumen by Robert Edward Hungate in 1951 [1]. This strain primarily utilizes plant-derived carbohydrates, such as cellulose, xylan, and cellobiose, as fermentation substrates, and produces ethanol and CO<sub>2</sub> as it primary fermentation end products, along with relatively law amount of acetate [2].

	This bacterium have high cellolytic ability and play a key roll for initial fiber degradation in rumen. Additioally, the production of H<sub>2</sub> during fermentation by ''R. albus'', providing electrons for CO₂ reduction and methane production by methanogenic archaea [3]. Consequently, understanding the metabolic pathways and symbiotic relationships of ''R. albus'' 7 is essential for ongoing research aimed at mitigating enteric methane emissions from livestock.		This bacterium have high cellolytic ability and play a key roll for initial fiber degradation in rumen. Additioally, the production of H<sub>2</sub> during fermentation by ''R. albus'', providing electrons for CO₂ reduction and methane production by methanogenic archaea [3]. Consequently, understanding the metabolic pathways and symbiotic relationships of ''R. albus'' 7 is essential for ongoing research aimed at mitigating enteric methane emissions from livestock.

Madachi at 02:21, 28 October 2026

2026-10-28T02:21:16Z

← Older revision		Revision as of 02:21, 28 October 2026
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	== Genome ==		== Genome ==
	[[File:Image.png\|thumb\|center\|Circos plot of ''R. albus'' 7. Source: Makoto Adachi]]		[[File:Image.png\|thumb\|center\|Circos plot of ''R. albus'' 7. Source: Makoto Adachi\|300x300px]]
	== DefenseFinder Results ==		== DefenseFinder Results ==