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Ruminococcaceae bacterium AE2021 - Revision history
2026-11-14T21:15:05Z
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Billkelleydonvis: Introduction and external links
2026-10-29T21:14:46Z
<p>Introduction and external links</p>
<p><b>New page</b></p><div><br />
== Introduction ==<br />
'''''Saccharofermentans'' sp. AE2021'''<br />
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''Saccharofermentans'' sp. AE2021(DSM 122476) was isolated from the plant-adherent fraction of bovine rumen contents in NZ [1, cow E]. AE2021 has not been phenotypically characterized. ''Saccharofermentans'' is one of the 14 genera regarded as part of the rumen core microbiome [2], and another ''Saccharofermentans'' strain (R-25) contributes to fibre digestion in the rumen with production of D-lactate [3].<br />
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The draft genome for AE3010 (3,083,950 bp) was generated through the Hungate1000 project with JGI [4].<br />
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NCBI: ''Ruminococcaceae'' bacterium.<br />
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GTDB: ''Saccharofermentans'' sp900176545.<br />
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Risk group: 1.<br />
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== Global Methane Hub Metadata ==<br />
{| class="wikitable"<br />
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|Methylome called by:<br />
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|Methyltransferases cloned by:<br />
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|MIC and Culturing Conditions by:<br />
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== Genome ==<br />
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== DefenseFinder Results ==<br />
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== Methylome ==<br />
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== Methylating E. coli Strains ==<br />
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== Culturing Conditions ==<br />
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== Antibiotic MIC Tests ==<br />
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== Protocols ==<br />
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== Transformation Results ==<br />
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== External Links ==<br />
[1] Noel S. 2013. Cultivation and community composition analysis of plant-adherent rumen bacteria. PhD dissertation. Massey University, Palmerston North, New Zealand. <nowiki>https://mro.massey.ac.nz/server/api/core/bitstreams/bcfbe4cb-19a9-40c0-b5e8-61f9ddb90ce0/content</nowiki>.<br />
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[2] Tovar-Herrera OE, Grinshpan I, Sorek G, Lybovits I, Levin L, Moraïs S, Mizrahi I. 2026. Core rumen microbes are functional generalists that sustain host metabolism and gut ecosystem function. Nat Ecol Evol 10: 44-58. doi: 10.1038/s41559-025-02904-3.<br />
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[3] Fukuma N, Koike S, Kobayashi Y. 2012. Involvement of recently cultured group U2 bacterium in ruminal fiber digestion revealed by coculture with ''Fibrobacter succinogenes'' S85. FEMS Microbiol Lett 336: 17-25. doi: 10.1111/j.1574-6968.2012.02649.x.<br />
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[4] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.</div>
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