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Billkelleydonvis: Introduction and external links
2026-10-30T03:17:54Z
<p>Introduction and external links</p>
<p><b>New page</b></p><div><br />
== Introduction ==<br />
'''''Lachnospiraceae'' bacterium AC2014'''<br />
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''Lachnospiraceae'' bacterium AC2014 (DSM 118844) was isolated from the plant-adherent fraction of bovine rumen contents in NZ [1, cow C]. It has not been phenotypically characterized, but was identified as a strain of ''Agathobacter ruminis'', a carbohydrate-fermenting bacterium that produces butyrate, acetate, lactate and hydrogen [2].<br />
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The draft genome for AC2014 (2,760,118 bp) was generated through the Hungate1000 project with JGI [3].<br />
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NCBI: ''Lachnospiraceae'' bacterium.<br />
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GTDB: ''Roseburia ruminis''. AC2014 belongs in the same species group as the type strain of ''A. ruminis''/''R. ruminis'' (JK623, DSM 29029) [2].<br />
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Risk group: 1.<br />
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== Global Methane Hub Metadata ==<br />
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== Genome ==<br />
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== DefenseFinder Results ==<br />
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== Methylome ==<br />
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== Methylating E. coli Strains ==<br />
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== Culturing Conditions ==<br />
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== Antibiotic MIC Tests ==<br />
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== Protocols ==<br />
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== Transformation Results ==<br />
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== External Links ==<br />
[1] Noel S. 2013. Cultivation and community composition analysis of plant-adherent rumen bacteria. PhD dissertation. Massey University, Palmerston North, New Zealand. <nowiki>https://mro.massey.ac.nz/server/api/core/bitstreams/bcfbe4cb-19a9-40c0-b5e8-61f9ddb90ce0/content</nowiki>.<br />
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[2] Rosero JA, Killer J, Sechovcova H, Mrazek J, Benada O, Fliegerova K, Havlik J, Kopecny J. 2016. Reclassification of ''Eubacterium rectale'' (Hauduroy et al. 1937) Prevot 1938 in a new genus ''Agathobacter'' gen. nov. as ''Agathobacter rectalis'' comb. nov., and description of ''Agathobacter ruminis'' sp. nov., isolated from the rumen contents of sheep and cows. Int J Syst Evol Microbiol 66: 768-773. doi: 10.1099/ijsem.0.000788.<br />
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[3] Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators; Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ. 2019. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnol 36: 359-367. doi: 10.1038/nbt.4110.</div>
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