View source for Megasphaera elsdenii T81


== Introduction ==

=== Strain characteristics and function in the rumen ===

=== Strain history and information ===

== Global Methane Hub Metadata ==
{| class="wikitable"
| valign="top" |Strain origin:
| valign="top" |
|-
| valign="top" |Isolated from:
| valign="top" |Cow rumen
|-
| valign="top" |Sequenced by:
| valign="top" |
|-
| valign="top" |Assembled by:
| valign="top" |William G. Alexander
|-
| valign="top" |Genome and methylome analysis by:
| valign="top" |
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| valign="top" |MIC and culturing conditions by:
| valign="top" |
|-
| valign="top" |Transformed by:
| valign="top" |
|}

== Genome ==
{| class="wikitable"
| colspan="2" valign="top" |''M. elsdenii'' T81 Genome Summary
|-
| valign="top" |Sequencing method
| valign="top" |Oxford Nanopore
|-
| valign="top" |Contigs
| valign="top" |1
|-
| valign="top" |Base pairs
| valign="top" |2.6 Mb
|-
| valign="top" |CDSs
| valign="top" |2,337
|-
| valign="top" |CRISPR
| valign="top" |7
|-
| valign="top" |Genes
| valign="top" |2,467
|-
| valign="top" |rRNA
| valign="top" |21
|-
| valign="top" |tRNA
| valign="top" |66
|-
| valign="top" |Miscellaneous RNA
| valign="top" |42
|-
| valign="top" |Antimicrobial resistance genes
| valign="top" |None
|}

== Methylome ==

=== Methylome analysis summary results ===
{| class="wikitable"
| colspan="2" |''L. ruminis'' WC1T17 Methylome Summary
|-
| valign="top" |Isolation Motif
| valign="top" |% Motif Methylation
|-
| valign="top" |GTTGN(6mA)C
| valign="top" |99.13
|-
| valign="top" |CAC(6mA)G
| valign="top" |92.58
|-
| valign="top" |CAGR(6mA)G
| valign="top" |99.54
|}

=== DefenseFinder Results ===
{| class="wikitable"
| colspan="2" valign="top" |''M. elsdenii'' T81 DefenseFinder Results
|-
| valign="top" |DefenseFinder System
| valign="top" |# Found
|-
| valign="top" |
| valign="top" |
|-
| valign="top" |
| valign="top" |
|-
| valign="top" |
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|}

=== Methylating ''Escherichia coli'' strains ===
''E. coli'' strain AGXXXXX engineered to carry methytransferases X, X, X for methylating plasmid DNA for ''M. elsdenii'' T81.

== Culturing Conditions ==

== Antimicrobial Susceptibility ==

== Transformation Results ==

== External Links ==